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Chemistry and Biochemistry of Enzymes


A enzyme is a catalytic biomolecule (protein) - produced by living cells - to increase the rate of chemical reactions.

Online available information resources on the chemistry and biochemistry of enzymes.

Further information categories about related topics are listed in the navigation menu on the left side of these page.

[Lec] [Nom] [Data] [Jour]


Lecture Notes, Tutorials

Enzyme Kinetics
Equations of Kinetics - Format: PDF - [e]

Enzyme Kinetics
Lecture notes - [e]

Enzyme Mechanisms
Lecture notes in biochemistry. University of Arizone - [e]

Introduction to Enzymes. The Medical Biochemistry Page - [e]

Introduction to Enzymes - Format: PDF - [e]

Introduction to Enzymes - Format: PDF - [e]

Lecture notes: Chemistry of Life. MIT OpenCourseWare - [e]

[Lec] [Nom] [Data] [Jour]



Enzyme Nomenclature
Nomenclature Committee of the International Union of Biochemistry and Molecular Biology (NC-IUBMB) In consultation with the IUPAC-IUBMB Joint Commission on Biochemical Nomenclature - [e]

Enzyme nomenclature database - ENZYME
... is a repository of information relative to the nomenclature of enzymes. ExPASy - [e]

The Integrated Relational Enzyme Database is a freely available resource focused on enzyme nomenclature - [e]

LIGAND - Enzyme
... for the Enzyme Nomenclature. IUBMB, IUPAC - [e]

[Lec] [Nom] [Data] [Jour]


Data and Databases

Anti-HIV enzyme inhibition data
... contains approximately 47,000 lines of data linked to 25,007 compounds. NIH - [e]

Biocatalysis/Biodegradation Database
... contains information on microbial biocatalytic reactions and biodegradation pathways for primarily xenobiotic, chemical compounds. University of Minnesota - [e]

The Comprehensive Enzyme Information System - [e]

Catalytic Site Atlas
CSA is a database documenting enzyme active sites and catalytic residues in enzymes of 3D structure - [e]

The CAZy database describes the families of structurally-related catalytic and carbohydrate-binding modules (or functional domains) of enzymes that degrade, modify, or create glycosidic bonds - [f]

CFG Databases
Glyco Enzymes - [e]

A database of dehydrogenase stereospecificities. Edward Jenner Institute - [e]

Enzyme Structures Database
This database contains the known enzyme structures that have been deposited in the Brookhaven Protein Data Bank - [e]

Information about the functional role of enzymes - [e]

Analysis of protein and nucleic acid sequences belonging to the superfamily of alpha/beta hydrolases homologous to cholinesterases - [e]

A Database of Enzyme Catalytic Mechanisms - [e]

Human Gene Mutation Database - [e]

Lipase Engineering Database
... integrates information on sequence and structure of lipases and related proteins sharing the same a/b hydrolase fold to facilitate protein engineering. University of Stuttgart - [e]

Mechanism, Annotation and Classification in Enzymes - [e]

The MEROPS database is an information resource for peptidases (also termed proteases, proteinases and proteolytic enzymes) and the proteins that inhibit them - [e]

... contains pathways involved in both primary [def] and secondary [def] metabolism, as well as associated compounds, enzymes, and genes. SRI - [e]

P450-containing Systems
The goal of this www Directory is to facilitate access to electronic resources world-wide for all researchers working in the field of P450 proteins and P450-containing systems - [e]

PhB is a database of protein phosphatases and contains information about their protein sequences - [e]

The Protein Kinase Resource is a web accessible compendium of information on the protein kinase family of enzymes - [e]

... is a database for Pyridoxal-5'-phosphate dependent enzymes mutation information - [e]

... is a tool for searching a protein sequence collections with peptide mass maps - [e]

The Restriction Enzyme Database - [e]

Restriction Enzyme Site Mapper
Maps sites for restriction enzymes (restriction endonucleases) in DNA sequence - [e]

Structure-Function Linkage Database: a database that links evolutionarily related sequences and structures from mechanistically diverse superfamilies of enzymes to their chemical reactions. UCSF - [e]

Restriction Enzyme analysis. Mangalam - [e]

Telomerase Database
... is a Web-based tool for the study of structure, function, and evolution of the telomerase ribonucleoprotein - [e]

Thermodynamics of Enzyme-Catalyzed Reactions
NIST Standard Reference Database 74 - [e]

TIM barrel Enzymes
A Database of TIM barrel Enzymes - [e]

[Lec] [Nom] [Data] [Jour]



Advances in Enzyme Regulation
This internationally acclaimed series reports progress at the cutting edge in the strategic area of regulation at the molecular level. Elsevier - [e]

Enzyme and Microbial Technology
... is an international, peer-reviewed journal publishing original research and reviews, of biotechnological significance and novelty, on basic and applied aspects of the use of enzymes, micro-organisms, animal cells and plant cells. Elsevier - [e]

FEBS Letters
An international journal established for the rapid publication of essentially final short reports in the fields of molecular biosciences. Elsevier - [e]

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Chemistry and Biochemistry of Enzymes
Enzymes, biochemistry, information
17.03.2012 00:00:00 [link check]
17.03.2012 [site update]

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Related Books and Scientific Literature: Enzymes:


Paul F. Cook, W.W. Cleland

Enzyme Kinetics and Mechanism

Enzyme Kinetics and Mechanism is a comprehensive textbook on steady-state enzyme kinetics. Organized according to the experimental process, the text covers kinetic mechanism, relative rates of steps along the reaction pathway, and chemical mechanism—including acid-base chemistry and transition state structure. Practical examples taken from the literature demonstrate theory throughout. The book also features numerous general experimental protocols and how-to explanations for interpreting kinetic data.

Written in clear, accessible language, graduate students well-versed in biochemistry will be able to understand and describe data at the fundamental level. Enzymologists and molecular biologists will find the text a useful reference.

Garland Science; 2007

Internetchemistry ChemLin 1996 - 2013 A. J.